Ancient Viral Genomes In Glaciers

Featured Image. Credit CC BY-SA 3.0, via Wikimedia Commons

Ancient Viral Genomes Preserved in Glaciers Reveal Earth’s Climate History and Virus Adaptations

Jen Fitschen, Author, BSc Computer Science and Oceanography

As humans alter the planet’s climate, scientists turn to Earth’s past to understand future changes. Glaciers, vast ice structures, act as natural archives, preserving records of past climates and ecosystems, including ancient viruses. This unique preservation helps scientists trace how viruses have adapted to shifting climates over millennia.

Reading History in Viral Genes

Greenland ice.
Greenland ice. Image by Tina Rolf via Unsplash

Our team of microbiologists and paleoclimatologists investigates ancient microorganisms preserved in glacier ice. Collaborating with experts like Lonnie Thompson and Virginia Rich from The Ohio State University, we study ice cores from the Guliya Glacier on the Tibetan Plateau. Our goal is to understand how viruses interacted with their environments through time.

Decoding Ancient Viral Genomes

Thwaites glaciers in Antarctica
Thwaites glaciers in Antarctica. Source: YouTube. Uploaded: British Antarctic Survey

We utilized metagenomes, collections of all genomes in environmental samples, to reconstruct viral genomes from nine distinct time intervals in the Guliya ice core. These intervals span three major cold-to-warm cycles, providing insight into how viral communities changed with climatic shifts. This approach allowed us to observe the impact of climate on viral evolution.

Expanding Knowledge of Glacier-Preserved Viruses

glacier
Glaciers falling apart. Image by Mliss via Depositphotos

Our research revealed genomes of approximately 1,705 virus species, significantly expanding the known ancient viral diversity in glaciers. This increase is more than fiftyfold compared to previous knowledge. However, only about a quarter of these species matched those in global datasets, suggesting a limited overlap with known glacial viruses.

Local vs. Global Viral Communities

Thwaites Glacier in West Antarctica.
Thwaites Glacier in West Antarctica. Image by By NASA – http://www.jpl.nasa.gov/news/news.php?release=2014-148 (JPL), Public Domain, https://commons.wikimedia.org/w/index.php?curid=33763182

Many of the viral species found were unique to the Tibetan Plateau, indicating that some glaciers’ viruses may be regionally specific. This discovery highlights a gap in global virus databases and emphasizes the need for more comprehensive data on glacial viruses to understand their distribution and evolution.

The Influence of Climate on Viral Diversity

Iceberg in Greenland
Iceberg in Greenland. Image by Xavier Balderas Cejudo via Unsplash

We observed that viral communities varied between cold and warm periods. Around 11,500 years ago, during the transition from the Last Glacial Stage to the Holocene, the glacier saw a distinct shift in viral communities. This change suggests that climatic conditions significantly influenced viral diversity and composition on the glacier.

Virus-Host Interactions

Thwaites Glaciers, Antarctica.
Thwaites Glaciers, Antarctica. Source: YouTube. Uploaded: Morgansoft.

Our study further explored how viruses interacted with their hosts. We used computer models to compare viral genomes with microbial genomes found in glacier environments. Our findings showed that viruses frequently infected Flavobacterium, a common bacterium in these icy habitats, indicating a specific viral-host relationship.

Gene Stealing for Survival

Genetic engineering and gene manipulation concept.
Gene engineering concept. Image by vchalup2 via Depositphotos.

Viruses on the Guliya Glacier appear to “steal” genes from their hosts to adapt their metabolisms. We identified 50 auxiliary metabolic genes within the viral genomes, related to the synthesis and breakdown of essential compounds. These genes likely help viruses and their hosts cope with the harsh glacier environment.

Impact on Host Fitness

Thwaites Glaciers in Antarctica.
Thwaites Glaciers in Antarctica. Source: YouTube. Uploaded: Vox.

The presence of these auxiliary genes suggests that viruses not only infect cells but also influence their fitness. By altering the metabolism of their hosts, viruses might affect their survival in extreme conditions, showcasing a complex interaction between viruses and their glacier environments.

Implications for Climate Science

Moon behind the ice
Moon behind the ice. Image by Kym Mackinnon via Unsplash

Our findings offer new perspectives on how viruses have responded to climatic changes over thousands of years. Understanding these ancient viral adaptations provides valuable insights for future research in virology and climate science. This knowledge helps predict how viruses might react to ongoing global climate change.

Conclusion

Iceberg in Greenland.
Iceberg in Greenland. Image by Annie Spratt via Unsplash

Glacier ice serves as a crucial record of Earth’s climate history and the life it has supported. By studying ancient viral genomes preserved in glaciers, scientists gain insights into the past interactions between viruses and their environments. As glaciers continue to disappear, preserving this knowledge becomes increasingly vital for understanding our planet’s climatic and microbial history.

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